Protein ZmNAC48
ZmNAC48 is a protein in the NAC family.
Information
TF Name: ZmNAC48
Species: Maize
TF Family: NAC
Gene Name(Synonym): NACTF48
Uniprot ID: B6SRZ1
Subgenome: 1

Protein ZmNAC48

ZmNAC48 is a protein in the NAC family.

Overview of domains present in v5 transcripts
PF02365
Zm00001eb036920_T002
Zm00001eb036920_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d031655DAPseq no logo sequence fimo position
Zm00001d031655DAPseq no logo sequence fimo position
Zm00001d031655ChIPseq no logo sequence fimo position
Zm00001d031655PChIPseq no logo sequence fimo position

Interactions where ZmNAC48 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmNAC48 is the target  
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There are 126 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb036920_T002 from maize genome v5

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02365
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Nucleotide Sequence
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GAGCCTCCCTCCTCACCCTGGAAAA...

GRMZM2G054252_T01 from maize genome v3


Related TFome: pUT6759

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPDTRSE
GEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTG
WVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Nucleotide Sequence
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CCCTCCTCACCCTGGAAAACACACG...

GRMZM2G054252_T02 from maize genome v3

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Nucleotide Sequence
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CCCTCCTCACCCTGGAAAACACACG...

Zm00001d031655_T001 from maize genome v4

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPDTRSE
GEKYFFAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTGWVMHEYRLAAPLHKNVSDSS
LLHIRRVHASTSLPLSLSLSLSLPPSPSEVIRNKSCM

Nucleotide Sequence
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AGAGCCTCCCTCCTCACCCTGGAAA...

Zm00001d031655_T002 from maize genome v4

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPDTRSE
GEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTG
WVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Nucleotide Sequence
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AGAGCCTCCCTCCTCACCCTGGAAA...

Zm00001d031655_T003 from maize genome v4

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRS
EGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKT
GWVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Nucleotide Sequence
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AGAGCCTCCCTCCTCACCCTGGAAA...

Zm00001eb036920_T001 from maize genome v5

Amino Acid Sequence
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MSAERAPVLVRHGGGGVEALRQLPPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPDTRSE
GEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTG
WVMHEYRLAAPLHKNGCSLAQAQGEWVVCRVFQKGGNRPRRRQREASPPPSASSSCVTDASSSDLDEVSS

Nucleotide Sequence
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AGAGCCTCCCTCCTCACCCTGGAAA...


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